code cleanup and added a license
This commit is contained in:
parent
05a92dd0b4
commit
f426082d87
39
pyedf.py
39
pyedf.py
@ -1,9 +1,18 @@
|
||||
#!/usr/bin/env python
|
||||
# encoding: utf-8
|
||||
"""
|
||||
pyedf.py
|
||||
|
||||
Created by Ray Slakinski on 2010-09-14.
|
||||
Copyright (c) 2010 Ray Slakinski. All rights reserved.
|
||||
"""
|
||||
import sys
|
||||
import getopt
|
||||
import re
|
||||
|
||||
def read_edf_file(filename):
|
||||
f = open(filename, 'r')
|
||||
data = f.read()
|
||||
f.close()
|
||||
|
||||
def read_edf_file(fileobj):
|
||||
data = fileobj.read()
|
||||
header = {}
|
||||
header['version'] = data[0:7].strip() # 8
|
||||
header['patient_id'] = data[7:88].strip() # 80
|
||||
@ -15,22 +24,36 @@ def read_edf_file(filename):
|
||||
header['data_duration'] = float(data[244:252].strip())
|
||||
header['num_signals'] = int(data[252:256].strip())
|
||||
# more data 256 chars down. in header, but ignoring for now
|
||||
print header
|
||||
records = []
|
||||
records_a = records.append
|
||||
rec_pos = 512
|
||||
rec_size = 36
|
||||
# skip first rec
|
||||
rec_pos += rec_size
|
||||
print rec_pos
|
||||
for i in range(header['num_items']-1):
|
||||
record = {}
|
||||
record_split = data[rec_pos:rec_pos+rec_size].split('\x14')
|
||||
matches = re.findall(r'([\d]+)', record_split[2])
|
||||
record['type'] = record_split[3].strip()
|
||||
record['time'] = {'start': int(matches[0]), 'durration': int(matches[1])}
|
||||
record['time'] = {
|
||||
'start': int(matches[0]),
|
||||
'durration': int(matches[1]),
|
||||
}
|
||||
records_a(record)
|
||||
rec_pos += rec_size
|
||||
return {'header': header, 'records': records}
|
||||
data = read_edf_file('20100912_230640_EVE.edf')
|
||||
|
||||
|
||||
def main():
|
||||
argv = sys.argv
|
||||
opts, args = getopt.getopt(argv[1:], "f", ["file="])
|
||||
# option processing
|
||||
for option, value in opts:
|
||||
if option == "-f" or option == '--file':
|
||||
f = open(value, 'r')
|
||||
data = read_edf_file(f)
|
||||
f.close()
|
||||
print data
|
||||
|
||||
if __name__ == '__main__':
|
||||
main()
|
||||
|
Reference in New Issue
Block a user